Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810401.1_cds_XP_016496188.1_10435
CDS Infomation

[gene=LOC107815177] [db_xref=GeneID:107815177] [protein=patellin-4-like] [protein_id=XP_016496188.1] [location=complement(join(5176..5421,5531..5675,5806..5930,6170..7162))] [gbkey=CDS]
Sequence

ATGACAGTAGAGGTACAATCTGAGGCAACTCAAGTAGCTGAGGTAGTTGTTCCAAAAGAA
GAATTAGAGGCTAAGAAGATTGTTGAGGAGGTTGAGAATGAGAAAGTAAAAGAAGAAGAG
GAGGAGGAGACCAAACCAAAGGCAATAGAGAAGAGCTCTTCTTATAGAGAAGAGAGCAAC
TTTCTCTCTGATCTCAAGGAGAATGAAAAGAAGGCTTTGAATGATCTCAAATCAAAACTC
GAGGAGGCCATTCTTGGTAACACTCTCTTCAAAAAAGAAGAGAGTGCCACCAAAAAGTCT
CCAGAGAAATCACCATCAGGTGAGGAGGAAGAAAAGAAAGATGATGAGAACAAGGTTGAG
GAGAAAGTAGAAGAGGAAGAGACAAAGAATGAGGAAAATTGCGATACAAATGGCGAGAAT
AAAGAGGAGAAAGAGAGTGAGGAGGAGGGGGCTGATTTAGATGTTGATGGAGTGGATAAA
GTGATCTCCATTTGGGGGGTACCACTATTGCCTAGCAAAGGGGATGAGAGAACCAATGTG
GTTCTTTTGAAATTCTTGAGAGCAAGGGATTACAAAGTGAATGAATCTTTCGAAATGCTC
AAAAAAACACTCCAATGGAGGAAGGATTTTAAGATCCAATCAATCTTGGATGAAGATTTA
GGGTCAGATCTTGCTCCAACTGCTTACATGAGTGGAACTGATAACCAAGGCCACCCTATT
TGTTACAACATTTTTGGAGTTTTGGATGATCAAGAGCTGTATAGCAAGACATTCGGGACG
GAGGAGAAGCGTAAGCAGTTCTTGAGATGGAGAGTGCAGTTAATGGAGAAGGGTATTCAA
CAGCTTGATTTCAAGGCTGGAGGTGTCAGTTCACTGCTTCAGATTAATGATCTGAAGAAC
TCCCCTGGACCTTCCAAGAAAGAGGTCAGGGTTGCTACAAAACAGGCTGTTGATCTTCTT
CAGGATAACTATCCTGAATTTGTTGCCAAAAATATATTCATCAATGTTCCATTTTGGTAT
TATGCTTTCCAGTCATTGCTCTCTCCTTTCCTAACTCAAAGAACCAAAAGCAAATTTGTT
TTTGCTCGTCCTGCCAAGGTCACTGAGACCTTGCTCAAGTACATTCCAATCCAAGAAATC
CCAATTCAATATGGTGGACTCAAGAGGGAGAATGACTTTGAGTTTTCAGTCTCGGACTGT
GAAGCTTCAGAAATGCTCCTTAAAGCTGGATCAACTGAAACCATTGAAATACCTGCAGCA
GAGGTGGGAAGTACATTTACCTGGGATGTTACCATTGTGGGCGGGGAAGTGAGCTATAAG
GAAGAATTTGTGCCAGAGGATGAAAATTCTTACACAATTATAATTCAGAAGGAGAAGAAG
TTGAGCTCGTCAATTCGCAACACATTCAAGAACAATGAAGCGGGAAAGATTGTGCTGACA
ATTAAGAACACTTCTAGCAAGAAGAAAAAGGCGTTTTACCGACACAAGATCAAGAAATCA
GCAATTTAA

Peptide Sequence

PEP ID

XP_016496188.1
PEP Infomation

PREDICTED: patellin-4-like [Nicotiana tabacum]
Sequence

MTVEVQSEATQVAEVVVPKEELEAKKIVEEVENEKVKEEEEEETKPKAIEKSSSYREESN
FLSDLKENEKKALNDLKSKLEEAILGNTLFKKEESATKKSPEKSPSGEEEEKKDDENKVE
EKVEEEETKNEENCDTNGENKEEKESEEEGADLDVDGVDKVISIWGVPLLPSKGDERTNV
VLLKFLRARDYKVNESFEMLKKTLQWRKDFKIQSILDEDLGSDLAPTAYMSGTDNQGHPI
CYNIFGVLDDQELYSKTFGTEEKRKQFLRWRVQLMEKGIQQLDFKAGGVSSLLQINDLKN
SPGPSKKEVRVATKQAVDLLQDNYPEFVAKNIFINVPFWYYAFQSLLSPFLTQRTKSKFV
FARPAKVTETLLKYIPIQEIPIQYGGLKRENDFEFSVSDCEASEMLLKAGSTETIEIPAA
EVGSTFTWDVTIVGGEVSYKEEFVPEDENSYTIIIQKEKKLSSSIRNTFKNNEAGKIVLT
IKNTSSKKKKAFYRHKIKKSAI

Transcript Sequence

Gene sequence data has not been registered.